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Triantennary-GalNac Ligands for Therapeutic siRNA Drug Delivery

Hepatocyte-targeted delivery of therapeutic drugs uses the asialoglycoprotein receptor (ASGPR) targeting ligand, N-Acetyl-D-galactosamine (GalNAc). ASGPR is very abundant in hepatocytes (liver cells), with approximately 0.5 to 1 million copies per cell. The receptor is recycled within 15-20 minutes. The concept of using trivalent-GalNAc clusters for drug delivery to hepatocytes was first demonstrated in 1987 (Juliano, 2016), and for oligonucleotide delivery in 1995 (Nair et al., 2014). The preferred ligand for the ASGR is a triantennary sugar terminating in galactose or N-acetyl galactosamine. 

The ASGR accumulates in coated pits after ligand binding, where it rapidly internalizes and is then trafficked to early sorting endosomes. The low pH endomembrane environment results in the dissociation of ligand and receptor, allowing the ASGR to rapidly return to the plasma membrane while the ligand is trafficked to lysosomes. GalNAc-siRNA conjugates are known to silence targeted genes in hepatocytes via subcutaneous administration at single-digit mg/kg doses in mice. Researchers studied a wide variety of chemical approaches to optimize the GalNAc-siRNA conjugate.

Early Work

The pioneering work of Lee and colleagues established the use of trivalent clusters for targeted delivery to the liver. In the late 1960s, Ashwell and colleagues identified a receptor in the liver that could rapidly remove glycoproteins lacking terminal sialic acid residues (Morell et al., 1968). This asialoglycoprotein receptor (ASGP-R), first isolated in 1974, was shown to bind galactose and is now recognized as the first mammalian lectin to be discovered (Stockert et al., 1974; Hudgin et al., 1974). The receptor is a C-type lectin predominantly expressed on the plasma membranes of hepatocytes, where it clears desialylated glycoproteins from the blood. The receptor is an ideal candidate for targeted drug delivery to the liver.

The "trivalent effect", where three GalNAc units significantly increase binding affinity compared to mono- or bivalent forms, was characterized explicitly by Lee et al. in 1983.

Lee et al. showed that the ASGPR has a geometric requirement for the spacing of GalNAc residues. A trivalent "cluster glycoside" with roughly 20 Å spacing between sugars achieved the highest binding affinity (Kumar & Turnbull, 2023; Zhou & Teng, 2021). These findings layed the groundwork for delivery of therapeutic oligonucleotides, proving that multivalency (specifically tri-valency) is essential for effective hepatocyte targeting (Springer & Dowdy, 2018).

In the 1980s, binding specificity established design rules for effective binding to ASGP-R. Baenziger and Maynard (1980) identified ASGP-R's preference for GalNAc over galactose in studies of glycosidase-treated glycoproteins. Lee and co-workers observed that the GalNAc monosaccharide was 19-fold better than galactose as an inhibitor of the asialoorosomucoid glycoprotein binding to isolated ASGP-R, and 27-fold better for inhibition of the glycoprotein binding to cultured hepatocytes and showed that the number of Gal residues/cluster and their branching mode, which determines the distance between the Gal residues, are significant determinants of binding affinity of the ligand to the mammalian hepatic lectin on the surface of hepatocytes. These observations enabled the development of the first clinical application of synthetic multivalent carbohydrates.

In 2019, the US Food and Drug Administration (FDA) approved Givosiran. Givosiran is a small interfering RNA (siRNA) drug targeting hepatocytes via a trivalent carbohydrate ligand based on N-acetylgalactosamine (GalNAc) for the treatment of acute hepatic porphyria.

ASGP-R binding.

This short, double-stranded RNA molecule suppresses gene expression in a sequence-specific manner via RNA interference (RNAi). One of the RNA strands, the guide strand, is complementary to the mRNA sequence targeted for degradation. The guide is the antisense sequence for the target mRNA. When the guide strand is incorporated into the RNA-induced silencing complex (RISC), it can bind to and degrade the targeted mRNA, thereby preventing expression of its encoded protein.

The GalNAc technology catapulted therapeutic oligonucleotide drugs into the clinic (Huang, 2017). However, the development of successful nucleic acid therapeutics also required many advances in hydrolytically stable analogs of phosphodiester linkages. The following focuses on the development of GalNAc-targeted RNA therapeutics.

Timeline of Development

The transition from basic carbohydrate chemistry to clinical drug delivery took several decades:

 Period

Milestone

 Late 1960s

Ashwell and Morell discover the ASGPR and its role in clearing glycoproteins from circulation (Kumar & Turnbull, 2023).

 Early 1980s

Y.C. Lee synthesizes the first synthetic "cluster glycosides" and identifies the trivalent GalNAc cluster as the optimal ligand (Kumar & Turnbull, 2023).

 2014–2017

Major biotech firms (like Alnylam and Ionis) publish the first clinical results using Tri-GalNAc conjugated to siRNA and ASOs (Schmidt et al., 2017; Tang & Khvorova, 2024, Nair et al. 2014). The conjugation of optimized, chemically modified siRNAs to an engineered ASGPR ligand resulted in conjugates with systemic stability against nucleases and improved pharmacokinetics relative to the unconjugated siRNAs. These conjugates showed robust and durable silencing of the targeted gene in the liver following single or multiple low-volume SC administrations.

2019

Givosiran becomes the first FDA-approved siRNA drug utilizing the Tri-GalNAc targeting technology (Kumar & Turnbull, 2023).

 

Alnylam Pharmaceuticals developed a high-affinity (Kd = 2.3 nM) trivalent glycocluster ligand for ASGP-R, with GalNAc sugars rather than galactose. The lipidated version of this ligand with a PEG spacer was effective for delivering short interfering RNA (siRNA) molecules in lipid nanoparticles to reduce factor VII expression in mice (Akinc et al., 2010; Jayaraman et al., 2012).

Triantennary GalNAc (GalNAcor TriGalNAc) solid phase synthesis support for the 3’-end and amidite.

siRNA Drug Givosiran

 

-- Phosphorothioate, N 2’-O-methyl-ribose, N 2’-Fluororibose

The TriGalNAc ligand is conjugated to the 3’end of the sense strand.

 

In 2017, Sanhueza reported the structure of X-ray crystal structures of the ASGPR carbohydrate-binding domain with lactose and a compact bicyclic ketal ligand for the receptor (See below.).

ASGPR carbohydrate-binding domain with lactose (5JPV).

ASGPR carbohydrate-binding domain with bicyclic ketal ligand (5JQ1).

 

A variety of CPG-Triantennary GalNAc ligands are now commercially available for the production of therapeutic GalNAc-conjugates.

CPG-TriGalNAcs

TriGalNAc-TEG C7 CPG

 

L96 Alnylam original GalNAc ligand

 

TriGalNAc-NHS

 

TriGalNAc-PRG4 3’-end

 

BSI TriGalNAC

 

TriGalNAc-PEG5-AmC6

 

 

 

TriGalNAc-KK-AMC6

 

Trivalent GalNAc TEG

 

TriGalNAc KK-Am C6

 

Can be conjugated to AmC6, PSs or POs.

 

Mono GalNAc-COOH

 

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