ATTO 390, Blue Emission
ATTO® 390 Fluorescent Dye Oligonucleotide Labeling
ATTO® 390 is a premium blue fluorescent dye developed for high-performance fluorescence imaging and analytical applications. The dye exhibits excellent brightness, outstanding photostability, and high fluorescence quantum yield, making it an excellent choice for fluorescence microscopy, molecular diagnostics, and bioanalytical research requiring stable blue fluorescence.
ATTO® 390 is commonly conjugated to DNA, RNA, PNA, LNA, siRNA, antisense oligonucleotides (ASOs), aptamers, peptides, proteins, and other amino-modified biomolecules using NHS ester chemistry, forming a stable amide bond with primary amino groups. Alternative site-specific conjugation methods, including click chemistry, can also be employed depending on the experimental design.
The dye exhibits excitation and emission maxima of approximately 390 nm and 479 nm, respectively, making it compatible with 375 nm, 385 nm, and 405 nm laser systems commonly found on fluorescence microscopes, confocal microscopes, imaging systems, and flow cytometers. Its blue emission provides excellent spectral separation from green, orange, red, and near-infrared fluorophores, making it well suited for multicolor fluorescence experiments.
ATTO® 390-labeled oligonucleotides are widely used for:
- Fluorescence microscopy
- Confocal microscopy
- Fluorescence in situ hybridization (FISH)
- Flow cytometry
- Live-cell imaging
- Molecular diagnostics
- DNA and RNA imaging
- Aptamer imaging
- Cell labeling
- Multiplex fluorescence assays
Bio-Synthesis offers custom ATTO® 390-labeled oligonucleotides for DNA, RNA, PNA, LNA, siRNA, ASOs, molecular beacons, aptamers, and other synthetic nucleic acids. ATTO® 390 can be incorporated at the 5′ end, 3′ end, or internal amino-modified positions, and may be combined with numerous additional modifications including quenchers, biotin, thiol modifiers, amino modifiers, PEG linkers, click chemistry handles, GalNAc, cholesterol, peptides, lipid conjugates, and other custom chemistries.
Each labeled oligonucleotide is synthesized under stringent quality standards and is available with optional HPLC purification, together with analytical characterization by HPLC, LC-MS, MALDI-TOF, UV-Vis spectroscopy, and fluorescence analysis to verify labeling efficiency, sequence identity, and product purity.
| Property |
Typical Value |
| Fluorophore |
ATTO® 390 |
| Fluorescence Color |
Blue |
| Typical Reactive Group |
NHS ester (or other conjugation formats) |
| Target Functional Group |
Primary amino groups |
| Bond Formed |
Stable amide bond |
| Excitation Maximum |
390 nm |
| Emission Maximum |
479 nm |
| Laser Compatibility |
375 nm, 385 nm and 405 nm lasers |
| Compatible Oligos |
DNA, RNA, PNA, LNA, siRNA, ASO, Aptamers |
| Typical Labeling Sites |
5′ end, 3′ end, internal amino modifiers |
Trademark Notice: ATTO® is a registered trademark of ATTO-TEC GmbH. Bio-Synthesis provides custom conjugation services using customer-specified or commercially available fluorescent dyes and is not affiliated with or endorsed by ATTO-TEC GmbH.
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Scales |
5' |
int. |
3' |
Discount |
| 100 nmole |
$ 210 |
Inquire |
$ 210 |
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| 250 nmole |
$ 260 |
Inquire |
$ 260 |
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| 1 µmole |
$ 360 |
Inquire |
$ 360 |
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| 5 umole |
Inquire |
Inquire |
Inquire |
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| 10 umole |
Inquire |
Inquire |
Inquire |
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| 15 umole |
Inquire |
Inquire |
Inquire |
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Product Information
-20°C To -70°C
Oligonucleotides are stable in solution at 4°C for up to 2 weeks. Properly reconstituted material stored at -20°C should be stable for at least 6 months. Dried DNA (when kept at 20°C) in a nuclease-free environment should be stable for years.
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ATTO 425, Blue Emission
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ATTO 465, Blue-Green Emission
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ATTO 488, Green Emission
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ATTO 495, Green Emission
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ATTO 514, Green Emission
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ATTO 520, Green Emission
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ATTO 532, Yellow-Green Emission
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ATTO Rho6G Oligonucleotide Dye Labeling
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ATTO 550 Dye Labeling
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ATTO Rho3B Oligonucleotide Dye Labeling
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ATTO Rho11 Fluorescent Dye Oligonucleotide Labeling
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ATTO Rho12 Oligonucleotide Dye Labeling
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ATTO Thio12 Oligonucleotide Dye Labeling
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ATTO Rho101 Fluorescent Dye Oligo Labeling
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ATTO 590, Red Emission
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ATTO 594, Red Emission
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ATTO Rho13 Oligonucleotide Dye Labeling
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ATTO 610, Red Emission
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ATTO 620, Far Red Emission
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ATTO Rho14 Fluorescent Dye Oligonucleotide Labeling
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ATTO 633, Far Red Emission
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ATTO 647, Far Red Emission
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ATTO 647N, Far Red Emission
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ATTO 655, Near Infrared Emission
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ATTO 665 Fluorescent Dye Oligonucleotide Labeling
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ATTO 725, Near Infrared Emission
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ATTO 740, Near Infrared Emission
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ATTO 540Q Quencher Oligonucleotide Labeling
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ATTO 580Q Quencher Oligonucleotide Labeling
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ATTO 612Q Quencher Oligonucleotide Labeling
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ATTO MB2 Redox-dye
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ATTO 565, Orange Emission
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ATTO 700, Near Infrared Emission
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ATTO 680, Near Infrared Emission
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ATTO 542, Yellow Emission
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ATTO 643 Fluorescent Dye Oligonucleotide Dye Labeling
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ATTO Oxa12 Fluorescent Dye Oligonucleotide Labeling
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ATTO Rho110 Fluorescent Dye Oligonucleotide Labeling
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References/Citations:
- ATTO-TEC GmbH. ATTO® 390 Fluorescent Label. ATTO-TEC GmbH
- ATTO-TEC GmbH. ATTO Dyes Product Guide. Fluorescence spectra, photophysical properties, and labeling chemistries.
- Lavis LD, Raines RT. Bright ideas for chemical biology. ACS Chemical Biology. 2008;3(3):142-155. DOI: 10.1021/cb700248m
- Hermanson GT. Bioconjugate Techniques. 3rd ed. Academic Press; 2013.
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